Software available#
Here we provide a summary of the software packages currently available on NMTHPC.
Legend for software table
(D) Default module version (G) GPU-accelerated (L) License-restricted
Application |
Version(s) |
Description |
|---|---|---|
2020.11, 2022.10, 2023.09 (D) |
Anaconda is a distribution of the Python and R programming languages for scientific computing, that aims to simplify package management and deployment. |
|
CUDA Toolkit (G) |
11.2, 11.3, 11.4, 11.7, 11.8, 12.1.1 (D), 12.9* |
The NVIDIA CUDA Toolkit includes GPU-accelerated libraries, debugging and optimization tools, a C/C++ compiler, and a runtime library to deploy your application. *Included in the |
10.3.0, 11.2.0, 13.2.0, 14.2.0 (D) |
The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Ada, Go, and D, as well as libraries for these languages (libstdc++,…). |
|
3.4.2, 3.5.0, 3.10.0 |
GDAL is a translator library for raster and vector geospatial data formats. |
|
2.31.0 |
Git is a distributed version control system that tracks changes in any set of computer files. |
|
1.10.1, 1.12.1, 1.14.5 |
HDF5 is a data model, library, and file format for storing and managing data. |
|
4.11 |
Software for motif discovery and next-gen sequencing analysis. |
|
2021.4.0, 2021.5.0, 2021.13 |
The Intel MPI Library is a multifabric message-passing library that implements the open source MPICH specification. |
|
0.6.2, 1.6.0, 1.6.6, 1.8.1, 1.9.4, 1.10.0, 1.10.2, 1.11.6 (D) |
Julia is a high-level, dynamic programming language. Its features are well suited for numerical analysis and computational science. |
|
2.1.7 |
Ncview is a visual browser for netCDF format files. |
|
4.8.1, 4.9.2 |
NetCDF (Network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. |
|
0.3.20, 0.3.28 |
OpenBLAS is an optimized Basic Linear Algebra Subprograms (BLAS) library based on GotoBLAS 21.13 BSD version. |
|
4.1.1, 4.1.4, 5.0.6 |
The Open MPI Project is an open source Message Passing Interface implementation that is developed and maintained by a consortium of academic, research, and industry partners. |
|
6.0.0, 8.1.1, 8.2.1, 9.5.0 |
PROJ is a generic coordinate transformation software that transforms geospatial coordinates from one coordinate reference system (CRS) to another. This includes cartographic projections as well as geodetic transformations. |
|
2.7.18, 3.10.2 (D) |
Python is a high-level, general-purpose programming language. Its design philosophy emphasizes code readability with the use of significant indentation. |
|
1.13.0 (G) |
PyTorch is a machine learning framework based on the Torch library, used for applications such as computer vision and natural language processing. |
|
3.6.3, 4.2.2, 4.4.0 (D) |
R is a programming language for statistical computing and graphics. |